Bacterial Stains
 
Gram Stain
- primary stain: crystal violet
  o stains both gram-positive & gram-negative bacteria
- mordant: Gram's iodine
  o enters bacterial cell & forms iodine-crystal violet complexes
- decolorizer: acetone-alcohol
  o dehydrates thick cell wall of gram-positive bacteria; iodine-crystal violet dye complex is trapped in cells: gram-positive cells remain purple
  o disrupts outer membrane & partially deteriorates thin cell wall of gram-negative bacteria; iodine-crystal violet dye complex escapes cells: gram-negative cells become clear
- counterstain: safranin
  o stains cell wall of cells
    purple of gram-positive cells masks pink color & remain purple
    unstained gram-negative cells become pink
- potential issues
  o factors that could cause gram-positive bacteria to appear gram-negative:
    old cultures; damage to cell wall
    overzealous heat fixation
    overzealous decolorization
 

Gram-positive bacteria
(Staphylococcus epidermidis)

Gram-negative bacteria
(Escherichia coli)
 
(Ziehl-Neelsen) Acid-Fast Stain
- primary stain: carbolfuchsin
  o carbolfuchsin (basic fuchsin in phenol), with mild heating, is able to penetrate the waxy layer of mycolic acids present in the cell walls of acid-fast bacteria, & enters both acid-fast & non-acid-fast bacteria (acid-fast bacteria are difficult to stain as most staining reagents are unable to penetrate the cell wall; phenol & heat assists dye entry into the cell)
- decolorizer: acid-alcohol (3% HCl in ethanol)
  o carbolfuchsin remains in acid-fast bacteria as the cell wall is resistant to the acid wash: acid-fast cells remain pink
  o without a resistant layer of mycolic acids in the cell wall, the acid wash removes the carbolfuchsin from the non-acid fast bacteria: non-acid-fast cells become clear
- counterstain: methylene blue
  o acid-fast cells retain the carbolfuchsin & remain pink
  o non-acid-fast cells take up the methylene blue & become blue-green
- acid-fast bacteria: genus Mycobacterium
  o genus Nocardia is generally weakly acid-fast, & may not retain the primary stain following the typical acid wash (a weak acid wash (using 1% sulfuric acid) is sometimes used, which will usually allow these bacteria to retain the primary stain while still removing the primary stain from non-acid-fast bacteria)
  o common acid-fast bacteria: Mycobacterium tuberculosis, Mycobacterium leprae, & Mycobacterium avium-intracellulare complex
 

Mix of acid-fast & non-acid-fast bacteria
(Mycobacterium gordonae & Staphylococcus epidermidis)
 
(Schaeffer-Fulton) Endospore Stain
- primary stain: malachite green
  o heating allows malachite green to enter the tough spore coat of endospores... cooling traps the dye inside the spore coat (spore coats, like acid-fast cell walls are resistant to most staining reagents); vegetative cells take up malachite green as well
- water wash
  o spore coats of endospores retain stain: endospores remain green
  o water washes malachite green from vegetative cells: vegetative cells become clear
- counterstain: safranin
  o endospores retain the malachite green & remain green
  o vegetative cells take up the safranin & become pink
- common endospore-forming bacteria: genus Bacillus; genus Clostridium
 

Endospore-forming bacterium Bacillus subtilis

Capsule Stain

Considerations:

1) Both the stain and capsule are more soluble in water than in copper sulfate so you may like your results better with the copper sulfate rinse.
2) Heat fixing doesn't seem to be helpful, so don't.
3) Blot, don't wipe the stain off the slide.

Water Wash

Heat Fix, Water Wash

Copper Sulfate Wash

Copper Sulfate Wash